STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7FEC8C2H2-type domain-containing protein. (254 aa)    
Predicted Functional Partners:
A0A3Q7GTX8
Uncharacterized protein.
      
 0.583
A0A3Q7I8Z7
PORR domain-containing protein.
      
 0.583
A0A3Q7J249
NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.
      
 0.582
A0A3Q7FP50
Uncharacterized protein.
      
 0.572
A0A3Q7FF93
Uncharacterized protein.
      
 0.570
A0A3Q7FDQ2
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
      
 0.507
A0A3Q7HSV7
Endo/exonuclease/phosphatase domain-containing protein.
      
 0.489
K4AZV7_SOLLC
Uncharacterized protein.
      
 0.489
SSR1
Uncharacterized protein.
      
 0.473
A0A3Q7F5M3
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.451
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.