STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7FEU3Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (183 aa)    
Predicted Functional Partners:
A0A3Q7JHM5
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.804
A0A3Q7EUR6
Protein kinase domain-containing protein.
    
 0.750
K4AW46_SOLLC
Adaptin_N domain-containing protein.
    
 0.750
A0A3Q7G3B6
AP-1 complex subunit gamma.
    
 0.710
A0A3Q7GBQ6
AP-1 complex subunit gamma.
    
 0.710
A0A3Q7HT18
Adaptin_N domain-containing protein.
    
 0.710
A0A3Q7F0Q5
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.702
A0A3Q7HRV1
Adaptin_N domain-containing protein.
    
 0.702
A0A3Q7HW92
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 0.702
A0A3Q7IFB0
Uncharacterized protein.
   
 0.702
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.