STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7FFD8C3H1-type domain-containing protein. (695 aa)    
Predicted Functional Partners:
A0A3Q7JN10
Uncharacterized protein.
    
 0.561
A0A3Q7EN42
WD_REPEATS_REGION domain-containing protein.
    
 0.495
A0A3Q7IY37
B30.2/SPRY domain-containing protein.
    
 0.492
A0A3Q7GL82
Uncharacterized protein.
  
   
 0.490
A0A3Q7INM7
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.489
A0A3Q7H3S7
Uncharacterized protein.
  
   
 0.465
A0A3Q7IBR3
CBS domain-containing protein.
  
  
  0.454
ARF19
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
 0.443
A0A3Q7F0G7
Uncharacterized protein.
  
  
 0.413
A0A3Q7HUB5
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.409
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.