STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7FHA5Uncharacterized protein. (102 aa)    
Predicted Functional Partners:
A0A3Q7IRI1
Uncharacterized protein.
   
 
 0.665
A0A3Q7G8M0
Uncharacterized protein.
   
 
 0.604
A0A3Q7FSY3
Uncharacterized protein.
   
 
 0.588
A0A3Q7JYX1
Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family.
   
   0.568
A0A3Q7HN48
Uncharacterized protein.
   
 
 0.564
A0A3Q7IDU8
Uncharacterized protein.
   
 
 0.564
A0A3Q7GUN1
Uncharacterized protein.
   
 
 0.563
A0A3Q7INM0
Uncharacterized protein.
   
 
 0.561
A1X876_SOLLC
Putative L19 ribosomal protein.
   
 
 0.561
A0A3Q7F5T8
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
   
   0.558
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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