STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7FHW6Epimerase domain-containing protein. (334 aa)    
Predicted Functional Partners:
A0A3Q7HVK9
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
   
 
 0.977
A0A3Q7ITW7
Uncharacterized protein.
   
 0.829
A0A3Q7IMM2
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
     
 0.815
A0A3Q7EPT6
S10_plectin domain-containing protein.
   
 0.799
A0A3Q7JYM3
S10_plectin domain-containing protein.
   
 0.799
F3H
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
   
  
 0.788
A0A3Q7F3F2
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.784
RPS25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.784
A0A3Q7HG80
Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
   
 0.767
A0A3Q7FTS1
Uncharacterized protein.
   
 0.763
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.