STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7FPX5PfkB domain-containing protein; Belongs to the carbohydrate kinase PfkB family. (485 aa)    
Predicted Functional Partners:
A0A494G9U2
AP_endonuc_2 domain-containing protein.
  
 
 0.824
A0A3Q7FSK2
Uncharacterized protein.
  
 
 0.736
A0A494G8Y1
Uncharacterized protein.
  
 
 0.711
A0A494G9Y0
S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.
   
 0.676
A0A3Q7EUX7
DHFR domain-containing protein.
  
  
 0.671
A0A3Q7J4A6
Glyco_tran_28_C domain-containing protein.
    
 0.658
A0A3Q7I9E4
Uncharacterized protein.
   
 0.636
A0A494G9A2
A_deaminase domain-containing protein.
   
 0.636
A0A3Q7G9W0
Uncharacterized protein.
  
 
 0.627
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.627
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.