STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7FVH8KH domain-containing protein. (504 aa)    
Predicted Functional Partners:
A0A3Q7G9T2
Uncharacterized protein.
    
 0.862
A0A3Q7HXU8
Uncharacterized protein.
    
   0.860
A0A3Q7FSY3
Uncharacterized protein.
    
   0.844
A0A3Q7G010
L51_S25_CI-B8 domain-containing protein.
    
   0.844
A0A3Q7FV71
Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.
    
   0.837
A0A3Q7GTF4
Uncharacterized protein.
    
   0.837
A0A3Q7HNB6
Uncharacterized protein.
    
   0.837
A0A3Q7J3V0
Uncharacterized protein.
    
   0.837
A0A3Q7F259
Uncharacterized protein.
    
   0.768
A0A3Q7F5T8
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
    
   0.768
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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