STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7G1C4Reverse transcriptase Ty1/copia-type domain-containing protein. (292 aa)    
Predicted Functional Partners:
A0A3Q7G6X1
Uncharacterized protein.
  
     0.520
A0A3Q7HAS0
Uncharacterized protein.
  
     0.519
A0A3Q7I6C2
Uncharacterized protein.
  
     0.516
A0A3Q7GET8
Uncharacterized protein.
  
     0.515
A0A3Q7IIV4
Uncharacterized protein.
  
     0.515
A0A3Q7EWD0
Uncharacterized protein.
  
     0.513
A0A3Q7GH39
Uncharacterized protein.
  
     0.513
A0A3Q7GSK8
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.511
A0A3Q7FZ97
Uncharacterized protein.
  
     0.508
A0A3Q7EVG1
Uncharacterized protein.
  
     0.506
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.