STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7G6E6TIR domain-containing protein. (1154 aa)    
Predicted Functional Partners:
A0A3Q7GYK8
Polysacc_synt_4 domain-containing protein.
      
 0.716
A0A3Q7IVV8
Polysacc_synt_4 domain-containing protein.
      
 0.716
A0A3Q7JW57
AAA domain-containing protein; Belongs to the disease resistance NB-LRR family.
      
 0.715
A0A3Q7F054
Protein kinase domain-containing protein.
      
 0.714
A0A3Q7FAQ7
Protein kinase domain-containing protein.
      
 0.714
A0A3Q7GYG0
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
      
 0.714
A0A3Q7HTK8
Protein kinase domain-containing protein.
      
 0.714
A0A3Q7FM01
Uncharacterized protein.
      
 0.713
A0A3Q7EID3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.712
H2B-3
Histone H2B.3; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
      
 0.712
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.