STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7G738Tubby-like F-box protein; Belongs to the TUB family. (426 aa)    
Predicted Functional Partners:
A0A3Q7EJ36
Uncharacterized protein.
   
  
 0.724
A0A3Q7F352
Uncharacterized protein; Belongs to the histidinol dehydrogenase family.
      
 0.536
KN1-2
Uncharacterized protein.
      
 0.455
A0A3Q7J9S0
Nucleoside diphosphate kinase.
      
 0.427
A0A3Q7ENN1
Calreticulin.
      
 0.419
A0A3Q7HFE2
Uncharacterized protein.
    
 0.418
A0A3Q7FR94
Nucleoside diphosphate kinase.
      
 0.400
A0A3Q7GYF2
Nucleoside diphosphate kinase.
      
 0.400
A0A3Q7H5L7
Uncharacterized protein.
      
 0.400
A0A3Q7HI94
Nucleoside diphosphate kinase.
      
 0.400
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.