STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7GBF1Uncharacterized protein. (524 aa)    
Predicted Functional Partners:
A0A3Q7H4N6
SAGA-associated factor 11.
    
 
 0.613
A0A3Q7FZ83
Uncharacterized protein.
   
 
 0.601
A0A3Q7JCU0
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 
 0.596
A0A3Q7F6P9
Uncharacterized protein.
   
 
 0.557
A0A3Q7F8Y5
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.557
A0A3Q7FU66
Uncharacterized protein.
   
 
 0.557
A0A3Q7FDZ4
SGF29 C-terminal domain-containing protein.
    
 
 0.540
A0A3Q7HXZ4
Uncharacterized protein.
    
 
 0.540
A0A3Q7J1F7
RRN7-type domain-containing protein.
    
 
 0.540
A0A3Q7GNN0
Transcriptional adapter.
    
 
 0.533
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.