STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7GBJ2Uncharacterized protein. (127 aa)    
Predicted Functional Partners:
A0A3Q7HVX7
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
   
 
 0.881
A0A3Q7IMP3
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.803
A0A3Q7E8X9
B5 domain-containing protein.
   
 
 0.690
A0A3Q7HI78
Uncharacterized protein.
   
 
 0.647
A0A3Q7GLT9
Uncharacterized protein.
    
 
 0.569
A0A3Q7GSU0
Uncharacterized protein.
    
 
 0.569
K4D3L7_SOLLC
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.569
A0A3Q7F5X2
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
   0.565
A0A3Q7FE47
Uncharacterized protein.
    
   0.565
A0A3Q7I723
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
   0.565
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.