STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7GKB4Uncharacterized protein. (300 aa)    
Predicted Functional Partners:
A0A3Q7GEH6
Uncharacterized protein.
  
     0.488
A0A3Q7IY94
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.488
A0A3Q7IFG8
Uncharacterized protein.
  
     0.471
A0A3Q7ED97
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.470
A0A3Q7I371
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.467
A0A3Q7GQN1
Uncharacterized protein.
  
     0.466
A0A3Q7IHL4
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.462
A0A3Q7I1X3
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.461
A0A3Q7HMW1
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.459
A0A3Q7JC68
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.454
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.