STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7GLR8Uncharacterized protein. (813 aa)    
Predicted Functional Partners:
A0A3Q7FPY4
Uncharacterized protein.
    
 0.767
A0A3Q7FV78
Uncharacterized protein.
    
 0.587
A0A3Q7GI20
Uncharacterized protein.
  
 
 0.581
A0A3Q7FT82
Uncharacterized protein.
  
 
 0.573
A0A3Q7F4J0
MACPF domain-containing protein.
  
  
 0.562
A0A3Q7EM05
DUF667 domain-containing protein.
    
 
 0.560
K4CBH1_SOLLC
Uncharacterized protein.
  
  0.557
A0A3Q7GXB2
NAC domain-containing protein.
  
 
  0.551
A0A3Q7ILV4
NAC domain-containing protein.
  
 
  0.551
A0A3Q7GF53
PMR5N domain-containing protein.
  
  0.550
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.