STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7GV89Uncharacterized protein. (559 aa)    
Predicted Functional Partners:
K4D336_SOLLC
R2R3 MYB transcription factor.
     
 0.536
A0A3Q7IT49
Uncharacterized protein.
  
     0.470
A0A3Q7FZY0
Uncharacterized protein.
  
     0.459
A0A3Q7EJI3
Uncharacterized protein.
  
     0.458
A0A3Q7IBF6
Uncharacterized protein.
  
     0.432
A0A3Q7ET96
Uncharacterized protein.
  
     0.426
A0A3Q7IVG4
Uncharacterized protein.
  
 
  0.420
A0A3Q7GRV3
Bulb-type lectin domain-containing protein.
  
 
   0.410
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.