STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7GY86Methyltransferase. (657 aa)    
Predicted Functional Partners:
A0A3Q7EBD6
TCP domain-containing protein.
  
     0.537
A0A3Q7GI20
Uncharacterized protein.
  
     0.535
A0A3Q7IK80
Uncharacterized protein.
  
     0.535
K4CBH1_SOLLC
Uncharacterized protein.
  
     0.535
K4CK84_SOLLC
CRM domain-containing protein.
  
     0.535
A0A3Q7HPQ4
Uncharacterized protein.
  
     0.534
A0A3Q7I3F5
Uncharacterized protein.
  
     0.533
K4DEI8_SOLLC
Uncharacterized protein.
  
     0.533
A0A3Q7FLU3
Methyltransferase.
  
     0.532
K4B1J2_SOLLC
Peptidase S59 domain-containing protein.
  
     0.532
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.