STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7HD92Uncharacterized protein. (68 aa)    
Predicted Functional Partners:
A0A3Q7FAH4
Fe2OG dioxygenase domain-containing protein.
  
     0.481
A0A3Q7F6T7
Fe2OG dioxygenase domain-containing protein.
  
     0.472
A0A3Q7EYK0
Fe2OG dioxygenase domain-containing protein.
  
     0.459
A0A3Q7JMC9
Uncharacterized protein.
  
     0.456
A0A3Q7HU00
Uncharacterized protein.
  
     0.427
K4C080_SOLLC
Uncharacterized protein.
  
     0.420
A0A3Q7G3A9
Uncharacterized protein.
  
     0.416
A0A3Q7GGJ4
Uncharacterized protein.
  
     0.416
A0A3Q7H6B5
Uncharacterized protein.
  
     0.408
A0A3Q7HXT7
Uncharacterized protein.
  
    0.404
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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