STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7HRS8Uncharacterized protein. (113 aa)    
Predicted Functional Partners:
A0A3Q7JFN4
Uncharacterized protein.
  
     0.526
A0A3Q7ESC8
Uncharacterized protein.
  
     0.524
A0A3Q7FY98
Uncharacterized protein.
  
     0.508
A0A3Q7EYM7
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 
 0.506
A0A3Q7HUW9
Uncharacterized protein.
  
    0.500
MT2
Uncharacterized protein.
  
     0.499
A0A3Q7ICW0
Uncharacterized protein.
  
     0.499
MT2Z_SOLLC
Metallothionein-like protein type 2; Metallothioneins have a high content of cysteine residues that bind various heavy metals.
  
     0.498
A0A3Q7IAL8
BED-type domain-containing protein.
  
     0.497
PSK4
Putative phytosulfokine peptide.
  
     0.496
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.