STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7HRZ5Uncharacterized protein. (131 aa)    
Predicted Functional Partners:
A0A3Q7FDV9
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.836
A0A3Q7EP48
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.830
A0A3Q7GZN1
Uncharacterized protein.
    
 0.823
A0A3Q7GZS6
Uncharacterized protein.
    
 0.823
A0A3Q7GRZ3
CBFD_NFYB_HMF domain-containing protein.
    
 0.815
A0A3Q7E881
Uncharacterized protein.
    
 0.805
A0A3Q7HIP8
Uncharacterized protein.
   
 
 0.773
psaD
Photosystem I reaction center subunit II, chloroplastic; PsaD can form complexes with ferredoxin and ferredoxin- oxidoreductase in photosystem I (PS I) reaction center. PSAD may encode the ferredoxin-docking protein.
   
 
 0.772
A0A3Q7ELZ3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.760
A0A3Q7J5R2
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.760
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.