STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7HSH3PH domain-containing protein. (727 aa)    
Predicted Functional Partners:
A0A3Q7H4I4
TPR_REGION domain-containing protein.
      
 0.561
A0A3Q7GLB0
SAM_MT_TRM5_TYW2 domain-containing protein.
   
  
 0.504
A0A3Q7EA74
Uncharacterized protein.
      
 0.442
A0A3Q7EMK1
MSP domain-containing protein.
    
 0.421
A0A3Q7EZZ1
MSP domain-containing protein.
    
 0.421
A0A3Q7F490
MSP domain-containing protein.
 
  
 0.421
A0A3Q7F4A5
MSP domain-containing protein.
 
  
 0.421
A0A3Q7FRE7
MSP domain-containing protein.
    
 0.421
A0A3Q7GQ43
MSP domain-containing protein.
 
  
 0.421
A0A3Q7HEW9
MSP domain-containing protein.
    
 0.421
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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