STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7HV91AAA domain-containing protein; Belongs to the AAA ATPase family. (359 aa)    
Predicted Functional Partners:
A0A3Q7HZ04
MPN domain-containing protein.
    
 0.750
A0A3Q7F5M6
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
 0.739
A0A3Q7IYW0
Uncharacterized protein.
   
 0.727
A0A3Q7HFD0
OTU domain-containing protein.
    
 0.699
A0A3Q7GKW6
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.679
A0A3Q7FY40
UBX domain-containing protein.
    
 0.674
A0A3Q7HUA6
UBX domain-containing protein.
    
 0.674
A0A3Q7GXF8
Uncharacterized protein.
    
 0.667
A0A3Q7INJ6
Josephin domain-containing protein.
   
 0.612
A0A3Q7H4E2
PRKCSH domain-containing protein.
    
 0.607
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.