STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7I643Histone H2A; Belongs to the histone H2A family. (139 aa)    
Predicted Functional Partners:
A0A3Q7FIK0
Uncharacterized protein.
    
 0.930
A0A3Q7FYU2
YL1_C domain-containing protein.
    
 
 0.919
A0A3Q7EHC5
SANT domain-containing protein.
    
 
 0.897
A0A3Q7G4Q1
RuvB-like helicase; Belongs to the RuvB family.
   
 
 0.891
A0A3Q7G5D7
Uncharacterized protein.
   
 
 0.884
A0A3Q7GXU0
RuvB-like helicase.
   
 0.880
A0A3Q7IZQ2
DNA helicase; Belongs to the RuvB family.
   
 0.880
A0A3Q7F8R2
Uncharacterized protein.
   
 0.879
A0A3Q7I9Y8
Uncharacterized protein.
   
 0.879
A0A3Q7J882
Uncharacterized protein; Belongs to the actin family.
   
 0.879
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.