Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7I643Histone H2A; Belongs to the histone H2A family. (139 aa)    
Predicted Functional Partners:
A0A3Q7EN42
WD_REPEATS_REGION domain-containing protein.
    
 0.924
A0A3Q7IY37
B30.2/SPRY domain-containing protein.
    
 0.920
A0A3Q7FIK0
Uncharacterized protein.
    
 0.908
A0A3Q7F513
Uncharacterized protein.
   
 0.904
A0A3Q7FYU2
YL1_C domain-containing protein.
    
 
 0.903
A0A3Q7EHC5
SANT domain-containing protein.
    
 
 0.902
A0A3Q7J882
Uncharacterized protein; Belongs to the actin family.
   
 0.895
A0A3Q7JK20
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.885
A0A3Q7H0E0
BCNT-C domain-containing protein.
    
 
 0.883
A0A3Q7FBL2
MRG domain-containing protein.
   
 0.882
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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