STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7IFD4Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
A0A3Q7G0Y0
RT_RNaseH domain-containing protein.
  
     0.498
A0A3Q7EZ80
Uncharacterized protein.
  
     0.490
A0A3Q7ECL6
Uncharacterized protein.
  
     0.458
A0A3Q7GEY2
Uncharacterized protein.
  
     0.430
A0A3Q7I2P5
Integrase_H2C2 domain-containing protein.
  
     0.427
A0A3Q7JBG8
RT_RNaseH_2 domain-containing protein.
  
     0.424
A0A3Q7JLW6
Uncharacterized protein.
  
     0.422
A0A3Q7IID1
Retrotrans_gag domain-containing protein.
  
     0.405
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.