STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7IMI2Uncharacterized protein. (208 aa)    
Predicted Functional Partners:
K4DDS6_SOLLC
Uncharacterized protein.
  
     0.489
A0A3Q7EP24
IGR domain-containing protein.
  
     0.479
A0A3Q7F2Z4
Uncharacterized protein.
  
     0.476
A0A3Q7HRK0
Uncharacterized protein.
  
     0.473
A0A3Q7IRE8
Sec8_exocyst domain-containing protein.
  
     0.440
A0A3Q7HNY2
BRCT domain-containing protein.
  
     0.437
A0A3Q7IEC5
Uncharacterized protein.
  
     0.435
A0A3Q7FVK8
Occludin_ELL domain-containing protein.
  
     0.418
A0A3Q7GRZ7
Uncharacterized protein.
  
     0.417
A0A3Q7FM17
Uncharacterized protein.
  
     0.410
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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