STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7INJ8Uncharacterized protein. (315 aa)    
Predicted Functional Partners:
PSBS
Photosystem II 22 kDa protein, chloroplastic; Seems to be involved in non-photochemical quenching, a process maintains the balance between dissipation and utilization of light energy to minimize generation of oxidizing molecules, thereby protecting the plant against photo-oxidative damage; Belongs to the ELIP/psbS family.
  
  
 0.672
A0A3Q7HZZ4
Uncharacterized protein.
  
  
 0.658
ELIP
Early light inducible protein.
  
   
 0.652
A0A3Q7I0X4
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
  
  
 0.602
CAB9
Protein kinase domain-containing protein.
   
  
 0.579
A0A3Q7JM05
Rieske domain-containing protein.
  
    0.546
A0A3Q7EM87
AP2/ERF domain-containing protein.
  
     0.533
A0A3Q7FRE5
Rhodanese domain-containing protein.
  
  
 0.489
A0A3Q7HL54
Dof-type domain-containing protein.
  
     0.487
A0A3Q7FK03
SAM domain-containing protein.
  
     0.482
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.