STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7IUI9Uncharacterized protein. (414 aa)    
Predicted Functional Partners:
A0A3Q7I1F3
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.961
DDTFR10
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
  
 0.845
A0A3Q7EMP9
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
  
 0.844
A0A3Q7JQE3
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
  
 0.843
A0A3Q7G3C5
Transcription elongation factor SPT5.
      
 0.823
A0A3Q7EI81
Uncharacterized protein.
   
 0.787
A0A3Q7H7H6
RPOLD domain-containing protein.
   
 
 0.728
A0A3Q7J4W6
RPOLD domain-containing protein.
   
 
 0.728
A0A3Q7EQU1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
0.685
A0A3Q7EMX4
Uncharacterized protein.
  
 
 0.638
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.