STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7IZP6E2F_TDP domain-containing protein. (449 aa)    
Predicted Functional Partners:
A0A3Q7IU12
Uncharacterized protein.
  
 
 
 0.925
DP1
Uncharacterized protein; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.
  
 
 
 0.916
RBR1
Uncharacterized protein.
   
 
 0.890
A0A3Q7HXH7
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
  
 0.566
A0A3Q7J115
CCT domain-containing protein.
      
 0.554
CdkB1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.522
A0A3Q7HRX5
Uncharacterized protein.
   
  
 0.435
A0A3Q7J1B3
Uncharacterized protein.
   
  
 0.435
A0A3Q7HQX7
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.430
A0A3Q7J0P3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.430
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.