STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7J6A7Reverse transcriptase Ty1/copia-type domain-containing protein. (190 aa)    
Predicted Functional Partners:
A0A3Q7H9B9
Uncharacterized protein.
  
     0.522
A0A3Q7INK4
Uncharacterized protein.
  
     0.490
A0A3Q7IHW6
Uncharacterized protein.
  
     0.477
A0A3Q7J5N5
Uncharacterized protein.
  
     0.475
A0A3Q7G520
Uncharacterized protein.
  
     0.473
A0A3Q7H8Z2
Uncharacterized protein.
  
     0.473
A0A3Q7H5P6
Uncharacterized protein.
  
     0.471
A0A3Q7FJQ9
Uncharacterized protein.
  
     0.470
A0A3Q7GED5
Uncharacterized protein.
  
     0.469
A0A3Q7G7Y5
Uncharacterized protein.
  
     0.468
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.