Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7JDZ1GRAS domain-containing protein; Belongs to the GRAS family. (468 aa)    
Predicted Functional Partners:
A0A3Q7IJ31
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
   0.730
A0A3Q7EZH3
Uncharacterized protein.
    
 
 0.701
A0A3Q7F7K4
Uncharacterized protein.
    
 
 0.701
A0A3Q7G9T0
C2H2-type domain-containing protein.
    
 
 0.701
A0A3Q7F183
BTP domain-containing protein.
    
   0.679
A0A3Q7FQF9
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
    
   0.577
A0A3Q7H3S1
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
    
   0.577
PhyA
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
      
 0.545
A0A3Q7HAD1
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
  
     0.524
A0A3Q7HJR1
F-box_5 domain-containing protein.
  
     0.523
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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