STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7JEK0Uncharacterized protein. (691 aa)    
Predicted Functional Partners:
A0A3Q7J882
Uncharacterized protein; Belongs to the actin family.
   
 0.823
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.819
A0A3Q7GS41
Uncharacterized protein; Belongs to the actin family.
    
 0.806
A0A3Q7GAC5
MPN domain-containing protein.
 
  
 0.755
A0A3Q7GXU0
RuvB-like helicase.
    
 0.749
A0A3Q7IZQ2
DNA helicase; Belongs to the RuvB family.
    
 0.749
A0A3Q7HIZ3
YL1_C domain-containing protein.
    
 0.727
A0A3Q7JN10
Uncharacterized protein.
  
0.684
A0A3Q7IEH3
Uncharacterized protein.
   
 0.674
A0A3Q7EHC5
SANT domain-containing protein.
    
 0.671
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.