STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7JYR3Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (261 aa)    
Predicted Functional Partners:
A0A3Q7FSD1
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.796
A0A3Q7G4Q5
Uncharacterized protein.
    
 
 0.784
A0A3Q7F8T6
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.591
A0A3Q7FFN7
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.591
A0A3Q7GC33
Uncharacterized protein.
   
 
 0.591
A0A3Q7JD24
Uncharacterized protein.
   
 
 0.591
A0A3Q7FFY2
PSII_BNR domain-containing protein.
    
 0.514
A0A3Q7GUI1
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 0.469
A0A3Q7FM19
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.450
A0A3Q7GJG3
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.450
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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