STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K4BN95_SOLLCUncharacterized protein. (116 aa)    
Predicted Functional Partners:
A0A3Q7H6H0
Uncharacterized protein.
     
 0.526
A0A3Q7EM50
Uncharacterized protein.
     
 0.520
A0A3Q7I7G6
Thymidylate_kin domain-containing protein.
     
 0.469
A0A3Q7EA63
GHMP_kinases_N domain-containing protein.
     
 0.461
ISPE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
     
 0.461
A0A3Q7IPB5
Guanylate kinase-like domain-containing protein.
  
  
 0.451
A0A3Q7JEX4
Guanylate kinase-like domain-containing protein.
  
  
 0.451
A0A3Q7EN40
Mevalonate kinase.
      
 0.420
A0A3Q7J4D7
SRP54 domain-containing protein.
      
 0.420
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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