STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K4CPF2_SOLLCUncharacterized protein. (112 aa)    
Predicted Functional Partners:
rps16
30S ribosomal protein S16.
  
 0.963
rps16-2
30S ribosomal protein S16, chloroplastic.
  
 0.963
A0A3Q7FUI9
Uncharacterized protein.
  
 0.960
A0A3Q7GMQ4
Uncharacterized protein.
  
 0.960
K4BQD9_SOLLC
Uncharacterized protein.
  
 
 0.951
A0A3Q7HY56
Uncharacterized protein.
  
 
 0.941
A0A3Q7FV71
Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.
  
 0.940
A0A3Q7J3V0
Uncharacterized protein.
  
 0.940
A0A3Q7IMP3
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.938
A0A3Q7EUB8
Uncharacterized protein.
   
 
 0.937
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.