STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K4D336_SOLLCR2R3 MYB transcription factor. (270 aa)    
Predicted Functional Partners:
BHLH1
BHLH domain-containing protein.
      
 0.816
DFRA_SOLLC
Dihydroflavonol 4-reductase; Bifunctional enzyme involved in flavonoid metabolism.
      
 0.714
Mi-1E
NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.
   
  
 0.641
Mi-1B
NBS-LRR resistance protein-like protein; Belongs to the disease resistance NB-LRR family.
   
  
 0.641
Mi-1C
NBS-LRR resistance protein-like protein; Belongs to the disease resistance NB-LRR family.
   
  
 0.641
Mi-1F
NBS-LRR resistance protein-like protein; Belongs to the disease resistance NB-LRR family.
   
  
 0.641
Mi-1G
Truncated NBS-LRR resistance protein-like protein; Belongs to the disease resistance NB-LRR family.
   
  
 0.641
A0A3Q7FJN5
BHLH domain-containing protein.
      
 0.550
A0A3Q7HG80
Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
      
 0.537
A0A3Q7GV89
Uncharacterized protein.
     
 0.536
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.