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Solyc00g187050.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g187050.2.1" - Leucine aminopeptidase LapA1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g187050.2.1Leucine aminopeptidase LapA1; Leucine aminopeptidase LapA2 (509 aa)    
Predicted Functional Partners:
GSH1
Glutamate--cysteine ligase, chloroplastic (523 aa)
     
 
  0.962
101263185
Uncharacterized protein; Gamma-glutamyl transpeptidase 4 (630 aa)
     
 
  0.920
101250409
annotation not available (581 aa)
     
 
  0.920
GSH2
Glutathione synthetase, chloroplastic (546 aa)
     
 
    0.912
Solyc08g081250.2.1
Peptidase M1 family protein (999 aa)
     
 
  0.906
Solyc01g097920.2.1
annotation not available (356 aa)
     
 
  0.889
101253940
annotation not available (351 aa)
     
 
  0.888
101249702
annotation not available (414 aa)
     
 
  0.863
101248107
annotation not available (413 aa)
     
 
  0.863
Solyc09g091840.2.1
Uncharacterized protein; Cytosolic glutathione reductase ; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (454 aa)
   
   
  0.855
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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