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MSI1 protein (Solanum lycopersicum) - STRING interaction network
"MSI1" - WD-40 repeat-containing protein MSI1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSI1WD-40 repeat-containing protein MSI1 (424 aa)    
Predicted Functional Partners:
FIE
Fertilization-independent endosperm protein (372 aa)
     
 
  0.992
100134887
Embryonic flower 2 (638 aa)
     
 
  0.985
101246300
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (448 aa)
     
 
  0.980
101257719
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (472 aa)
     
 
  0.975
RBR1
Retinoblastoma-related protein 1 (1018 aa)
     
 
  0.968
101261878
Uncharacterized protein; Histone acetyltransferase of the GNAT family 2 (468 aa)
     
 
  0.961
EZ1
Histone-lysine N-methyltransferase; EZ1 (829 aa)
     
 
  0.959
101255661
Uncharacterized protein; Embryonic flower 1 (EMF1) (1183 aa)
       
 
  0.955
EZ2
Histone-lysine N-methyltransferase; EZ2 (921 aa)
     
 
  0.917
Solyc02g093200.2.1
annotation not available (463 aa)
     
 
  0.917
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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