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LOC543840 protein (Solanum lycopersicum) - STRING interaction network
"LOC543840" - Floral homeotic protein AGAMOUS in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC543840Floral homeotic protein AGAMOUS; Probable transcription factor involved in regulating genes that determines stamen and carpel development in wild-type flowers (248 aa)    
Predicted Functional Partners:
FALSIFLORA
FLORICAULA/LEAFY-like protein (429 aa)
       
 
  0.719
wus
Protein WUSCHEL; Transcription factor that plays a central role during developmental processes such as early embryogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). May induce shoot stem cells activity in order to maintain the stem cell identity (By similarity) (272 aa)
           
  0.686
BL3
Hop-interacting protein THI035 (644 aa)
       
 
  0.610
101255963
Floral homeotic protein (HUA1) (497 aa)
           
  0.610
101055576
DNA polymerase alpha catalytic subunit (1561 aa)
       
 
  0.609
101244675
Uncharacterized protein; LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (896 aa)
       
 
  0.607
Solyc04g076280.2.1
Uncharacterized protein; AGAMOUS-like 24 (195 aa)
       
 
  0.598
101268317
annotation not available (252 aa)
     
 
0.561
Solyc10g017630.1.1
annotation not available (174 aa)
       
 
  0.560
Solyc02g093150.2.1
Uncharacterized protein; AP2 transcription factor SlAP2c (446 aa)
           
  0.552
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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