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STRINGSTRING
Solyc07g032590.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g032590.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g032590.1.1annotation not available (218 aa)    
Predicted Functional Partners:
Solyc07g063510.2.1
annotation not available (449 aa)
 
     
  0.463
Solyc04g079870.1.1
annotation not available (329 aa)
         
  0.461
101263161
annotation not available (447 aa)
         
  0.461
Solyc07g016020.1.1
annotation not available (187 aa)
 
          0.447
Solyc07g032580.1.1
annotation not available (126 aa)
 
          0.446
Solyc07g016040.1.1
annotation not available (122 aa)
 
          0.446
101267493
Uncharacterized protein; Porphyromonas-type peptidyl-arginine deiminase family protein (375 aa)
         
  0.427
OAT
Uncharacterized protein; Ornithine aminotransferase ; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (425 aa)
   
   
  0.413
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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