Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MPLB_1420011 | MPLB_1490060 | MPLB_1420011 | MPLB_1490060 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.687 |
MPLB_1420011 | MPLB_1710048 | MPLB_1420011 | MPLB_1710048 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | Asparaginase. | 0.520 |
MPLB_1420011 | guaA | MPLB_1420011 | MPLB_40021 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.525 |
MPLB_1420011 | murI | MPLB_1420011 | MPLB_1130031 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.540 |
MPLB_1420011 | nadE | MPLB_1420011 | MPLB_1120016 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.551 |
MPLB_1420011 | yneH | MPLB_1420011 | MPLB_1080099 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | Glutaminase; Belongs to the glutaminase family. | 0.590 |
MPLB_1490060 | MPLB_1420011 | MPLB_1490060 | MPLB_1420011 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | 0.687 |
MPLB_1490060 | MPLB_1710048 | MPLB_1490060 | MPLB_1710048 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Asparaginase. | 0.589 |
MPLB_1490060 | murI | MPLB_1490060 | MPLB_1130031 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.648 |
MPLB_1490060 | nadE | MPLB_1490060 | MPLB_1120016 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.761 |
MPLB_1490060 | yneH | MPLB_1490060 | MPLB_1080099 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutaminase; Belongs to the glutaminase family. | 0.602 |
MPLB_1710048 | MPLB_1420011 | MPLB_1710048 | MPLB_1420011 | Asparaginase. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | 0.520 |
MPLB_1710048 | MPLB_1490060 | MPLB_1710048 | MPLB_1490060 | Asparaginase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.589 |
MPLB_1710048 | guaA | MPLB_1710048 | MPLB_40021 | Asparaginase. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.466 |
MPLB_1710048 | murI | MPLB_1710048 | MPLB_1130031 | Asparaginase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.558 |
MPLB_1710048 | nadE | MPLB_1710048 | MPLB_1120016 | Asparaginase. | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.548 |
MPLB_1710048 | yneH | MPLB_1710048 | MPLB_1080099 | Asparaginase. | Glutaminase; Belongs to the glutaminase family. | 0.578 |
guaA | MPLB_1420011 | MPLB_40021 | MPLB_1420011 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | 0.525 |
guaA | MPLB_1710048 | MPLB_40021 | MPLB_1710048 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Asparaginase. | 0.466 |
guaA | guaB | MPLB_40021 | MPLB_1900014 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.999 |
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