STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLB_1340012SMP-30/gluconolaconase/LRE-like region-containing protein. (285 aa)    
Predicted Functional Partners:
MPLB_1340011
Helix-turn-helix domain-containing protein.
 
     0.850
MPLB_660053
4-carboxymuconolactone decarboxylase.
 
      0.782
MPLB_20077
Putative malonic semialdehyde oxidative decarboxylase; Belongs to the TPP enzyme family.
  
 
 0.673
MPLB_20076
Uncharacterized protein.
  
 
 0.609
trpE(G
Anthranilate synthase.
    
  0.577
iolB
5-deoxy-glucuronate isomerase.
  
  
 0.565
MPLB_1340010
AB hydrolase-1 domain-containing protein.
       0.433
Your Current Organism:
Mesorhizobium sp. ORS3324
NCBI taxonomy Id: 408180
Other names: M. sp. ORS 3324, Mesorhizobium sp. ORS 3324
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.