Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MPLB_1280075 | MPLB_1680027 | MPLB_1280075 | MPLB_1680027 | Putative FMN-linked oxidoreductase dihydropyrimidine/dihydroorate dehydrogenase. | Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.471 |
MPLB_1280075 | csaA | MPLB_1280075 | MPLB_1540083 | Putative FMN-linked oxidoreductase dihydropyrimidine/dihydroorate dehydrogenase. | Protein CsaA. | 0.699 |
MPLB_1280075 | metG | MPLB_1280075 | MPLB_160007 | Putative FMN-linked oxidoreductase dihydropyrimidine/dihydroorate dehydrogenase. | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | 0.402 |
MPLB_1280075 | pheT | MPLB_1280075 | MPLB_10003 | Putative FMN-linked oxidoreductase dihydropyrimidine/dihydroorate dehydrogenase. | Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.934 |
MPLB_1280075 | pyrD | MPLB_1280075 | MPLB_1610012 | Putative FMN-linked oxidoreductase dihydropyrimidine/dihydroorate dehydrogenase. | Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.528 |
MPLB_1280075 | secDF | MPLB_1280075 | MPLB_1200027 | Putative FMN-linked oxidoreductase dihydropyrimidine/dihydroorate dehydrogenase. | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.428 |
MPLB_1540084 | csaA | MPLB_1540084 | MPLB_1540083 | Uncharacterized protein. | Protein CsaA. | 0.760 |
MPLB_1680027 | MPLB_1280075 | MPLB_1680027 | MPLB_1280075 | Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Putative FMN-linked oxidoreductase dihydropyrimidine/dihydroorate dehydrogenase. | 0.471 |
MPLB_1680027 | csaA | MPLB_1680027 | MPLB_1540083 | Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Protein CsaA. | 0.724 |
MPLB_1680027 | leuS | MPLB_1680027 | MPLB_660056 | Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.990 |
MPLB_1680027 | metG | MPLB_1680027 | MPLB_160007 | Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | 0.407 |
MPLB_1680027 | pheT | MPLB_1680027 | MPLB_10003 | Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.967 |
MPLB_1750020 | csaA | MPLB_1750020 | MPLB_1540083 | Uncharacterized protein. | Protein CsaA. | 0.664 |
csaA | MPLB_1280075 | MPLB_1540083 | MPLB_1280075 | Protein CsaA. | Putative FMN-linked oxidoreductase dihydropyrimidine/dihydroorate dehydrogenase. | 0.699 |
csaA | MPLB_1540084 | MPLB_1540083 | MPLB_1540084 | Protein CsaA. | Uncharacterized protein. | 0.760 |
csaA | MPLB_1680027 | MPLB_1540083 | MPLB_1680027 | Protein CsaA. | Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.724 |
csaA | MPLB_1750020 | MPLB_1540083 | MPLB_1750020 | Protein CsaA. | Uncharacterized protein. | 0.664 |
csaA | leuS | MPLB_1540083 | MPLB_660056 | Protein CsaA. | Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.619 |
csaA | metG | MPLB_1540083 | MPLB_160007 | Protein CsaA. | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | 0.555 |
csaA | pheS | MPLB_1540083 | MPLB_10004 | Protein CsaA. | Phenylalanine--tRNA ligase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. | 0.997 |
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