Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
rhaML-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. (104 aa)    
Predicted Functional Partners:
MPLB_1620001
Carbohydrate kinase, FGGY.
 
  
 0.957
lsrD
AI2 transporter membrane component of ABC superfamily; Belongs to the binding-protein-dependent transport system permease family.
 
    0.921
MPLB_790089
Carbohydrate kinase, FGGY.
 
  
 0.817
yuxG
Uncharacterized oxidoreductase YuxG.
 
  
 0.809
MPLB_1640006
Putative enzyme.
 
     0.800
lsrB
AI2 transporter periplasmic-binding component of ABC superfamily.
 
    0.764
MPLB_1640004
DeoR family transcription regulator.
 
     0.744
MPLB_1510187
Putative oxidoreductase.
 
  
 0.658
alsC
D-allose transporter subunit membrane component of ABC superfamily; Belongs to the binding-protein-dependent transport system permease family.
 
    0.620
rbsA-3
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
    0.526
Your Current Organism:
Mesorhizobium sp. ORS3324
NCBI taxonomy Id: 408180
Other names: M. sp. ORS 3324, Mesorhizobium sp. ORS 3324
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