Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MPLB_1590008 | MPLB_170072 | MPLB_1590008 | MPLB_170072 | Cell division protein FtsK/SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family. | Zinc metalloprotease. | 0.663 |
MPLB_170072 | MPLB_1590008 | MPLB_170072 | MPLB_1590008 | Zinc metalloprotease. | Cell division protein FtsK/SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family. | 0.663 |
MPLB_170072 | MPLB_2120001 | MPLB_170072 | MPLB_2120001 | Zinc metalloprotease. | Undecaprenyl pyrophosphate synthase. | 0.774 |
MPLB_170072 | bamA | MPLB_170072 | MPLB_170071 | Zinc metalloprotease. | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.950 |
MPLB_170072 | cdsA | MPLB_170072 | MPLB_170073 | Zinc metalloprotease. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.875 |
MPLB_170072 | frr | MPLB_170072 | MPLB_170075 | Zinc metalloprotease. | Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.754 |
MPLB_170072 | ftsK | MPLB_170072 | MPLB_700006 | Zinc metalloprotease. | DNA translocase FtsK. | 0.646 |
MPLB_170072 | ispU | MPLB_170072 | MPLB_170074 | Zinc metalloprotease. | Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.888 |
MPLB_170072 | lepB | MPLB_170072 | MPLB_1740041 | Zinc metalloprotease. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.724 |
MPLB_170072 | proS | MPLB_170072 | MPLB_1270015 | Zinc metalloprotease. | Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily. | 0.657 |
MPLB_170072 | pyrH | MPLB_170072 | MPLB_170076 | Zinc metalloprotease. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.718 |
MPLB_2120001 | MPLB_170072 | MPLB_2120001 | MPLB_170072 | Undecaprenyl pyrophosphate synthase. | Zinc metalloprotease. | 0.774 |
MPLB_2120001 | cdsA | MPLB_2120001 | MPLB_170073 | Undecaprenyl pyrophosphate synthase. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.892 |
MPLB_2120001 | frr | MPLB_2120001 | MPLB_170075 | Undecaprenyl pyrophosphate synthase. | Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.787 |
MPLB_2120001 | proS | MPLB_2120001 | MPLB_1270015 | Undecaprenyl pyrophosphate synthase. | Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily. | 0.834 |
MPLB_2120001 | pyrH | MPLB_2120001 | MPLB_170076 | Undecaprenyl pyrophosphate synthase. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.705 |
bamA | MPLB_170072 | MPLB_170071 | MPLB_170072 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Zinc metalloprotease. | 0.950 |
bamA | cdsA | MPLB_170071 | MPLB_170073 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.418 |
bamA | frr | MPLB_170071 | MPLB_170075 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.780 |
bamA | ispU | MPLB_170071 | MPLB_170074 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.459 |
page 1 of 3