Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kamAL-lysine 2,3-aminomutase. (366 aa)    
Predicted Functional Partners:
epmA
Elongation factor P--(R)-beta-lysine ligase.
 
  
 0.820
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.818
ygeA
Putative racemase.
     
  0.812
MPLB_2040027
CheR-type methyltransferase domain-containing protein.
   
   0.801
MPLB_1670026
NodB homology domain-containing protein.
   
   0.767
lysC
Aspartokinase; Belongs to the aspartokinase family.
    
 0.640
MPLB_280041
Amino_oxidase domain-containing protein.
    
  0.602
MPLB_1510159
Aspartate racemase.
     
  0.598
MPLB_1640020
Aspartate racemase.
     
  0.598
mutB
Methylmalonyl-CoA mutase large subunit (MCM-alpha).
    
  0.585
Your Current Organism:
Mesorhizobium sp. ORS3324
NCBI taxonomy Id: 408180
Other names: M. sp. ORS 3324, Mesorhizobium sp. ORS 3324
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