Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MPLB_110103 | MPLB_1610005 | MPLB_110103 | MPLB_1610005 | Flagellar motor switch protein FliM. | Multi-sensor hybrid histidine kinase. | 0.936 |
MPLB_110103 | MPLB_250105 | MPLB_110103 | MPLB_250105 | Flagellar motor switch protein FliM. | Histidine triad (HIT) protein. | 0.555 |
MPLB_110103 | flgK | MPLB_110103 | MPLB_110075 | Flagellar motor switch protein FliM. | Flagellar hook-associated protein FlgK. | 0.989 |
MPLB_1610005 | MPLB_110103 | MPLB_1610005 | MPLB_110103 | Multi-sensor hybrid histidine kinase. | Flagellar motor switch protein FliM. | 0.936 |
MPLB_1610005 | MPLB_250105 | MPLB_1610005 | MPLB_250105 | Multi-sensor hybrid histidine kinase. | Histidine triad (HIT) protein. | 0.655 |
MPLB_1610005 | flgK | MPLB_1610005 | MPLB_110075 | Multi-sensor hybrid histidine kinase. | Flagellar hook-associated protein FlgK. | 0.635 |
MPLB_1610005 | nodQ | MPLB_1610005 | MPLB_1060013 | Multi-sensor hybrid histidine kinase. | Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.413 |
MPLB_1610005 | rpoB | MPLB_1610005 | MPLB_510012 | Multi-sensor hybrid histidine kinase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.483 |
MPLB_250105 | MPLB_110103 | MPLB_250105 | MPLB_110103 | Histidine triad (HIT) protein. | Flagellar motor switch protein FliM. | 0.555 |
MPLB_250105 | MPLB_1610005 | MPLB_250105 | MPLB_1610005 | Histidine triad (HIT) protein. | Multi-sensor hybrid histidine kinase. | 0.655 |
MPLB_250105 | MPLB_250106 | MPLB_250105 | MPLB_250106 | Histidine triad (HIT) protein. | NUDIX hydrolase. | 0.663 |
MPLB_250105 | MPLB_250107 | MPLB_250105 | MPLB_250107 | Histidine triad (HIT) protein. | Stress responsive alpha-beta barrel domain protein. | 0.583 |
MPLB_250105 | flgK | MPLB_250105 | MPLB_110075 | Histidine triad (HIT) protein. | Flagellar hook-associated protein FlgK. | 0.555 |
MPLB_250105 | nodQ | MPLB_250105 | MPLB_1060013 | Histidine triad (HIT) protein. | Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.697 |
MPLB_250105 | rpoB | MPLB_250105 | MPLB_510012 | Histidine triad (HIT) protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.777 |
MPLB_250105 | rpoC | MPLB_250105 | MPLB_510013 | Histidine triad (HIT) protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.791 |
MPLB_250105 | rpoZ | MPLB_250105 | MPLB_1740035 | Histidine triad (HIT) protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.784 |
MPLB_250105 | slyX | MPLB_250105 | MPLB_100075 | Histidine triad (HIT) protein. | Protein SlyX homolog; Belongs to the SlyX family. | 0.669 |
MPLB_250106 | MPLB_250105 | MPLB_250106 | MPLB_250105 | NUDIX hydrolase. | Histidine triad (HIT) protein. | 0.663 |
MPLB_250106 | MPLB_250107 | MPLB_250106 | MPLB_250107 | NUDIX hydrolase. | Stress responsive alpha-beta barrel domain protein. | 0.733 |
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