Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MPLB_1300013 | MPLB_1590018 | MPLB_1300013 | MPLB_1590018 | Cystathionine beta-synthase. | Ethanolamine-phosphate phospho-lyase (Modular protein). | 0.710 |
MPLB_1300013 | MPLB_680015 | MPLB_1300013 | MPLB_680015 | Cystathionine beta-synthase. | Aminotransferase. | 0.636 |
MPLB_1300013 | MPLB_790132 | MPLB_1300013 | MPLB_790132 | Cystathionine beta-synthase. | 4Fe-4S ferredoxin-type domain-containing protein. | 0.506 |
MPLB_1300013 | gltB | MPLB_1300013 | MPLB_110020 | Cystathionine beta-synthase. | Glutamate synthase, large subunit. | 0.527 |
MPLB_1300013 | lysC | MPLB_1300013 | MPLB_1420005 | Cystathionine beta-synthase. | Aspartokinase; Belongs to the aspartokinase family. | 0.677 |
MPLB_1590018 | MPLB_1300013 | MPLB_1590018 | MPLB_1300013 | Ethanolamine-phosphate phospho-lyase (Modular protein). | Cystathionine beta-synthase. | 0.710 |
MPLB_1590018 | MPLB_680015 | MPLB_1590018 | MPLB_680015 | Ethanolamine-phosphate phospho-lyase (Modular protein). | Aminotransferase. | 0.686 |
MPLB_1590018 | MPLB_790132 | MPLB_1590018 | MPLB_790132 | Ethanolamine-phosphate phospho-lyase (Modular protein). | 4Fe-4S ferredoxin-type domain-containing protein. | 0.690 |
MPLB_1590018 | gcvP | MPLB_1590018 | MPLB_1190011 | Ethanolamine-phosphate phospho-lyase (Modular protein). | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.857 |
MPLB_1590018 | gltB | MPLB_1590018 | MPLB_110020 | Ethanolamine-phosphate phospho-lyase (Modular protein). | Glutamate synthase, large subunit. | 0.842 |
MPLB_1590018 | lysC | MPLB_1590018 | MPLB_1420005 | Ethanolamine-phosphate phospho-lyase (Modular protein). | Aspartokinase; Belongs to the aspartokinase family. | 0.851 |
MPLB_1590018 | pdhB | MPLB_1590018 | MPLB_140069 | Ethanolamine-phosphate phospho-lyase (Modular protein). | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.770 |
MPLB_680015 | MPLB_1300013 | MPLB_680015 | MPLB_1300013 | Aminotransferase. | Cystathionine beta-synthase. | 0.636 |
MPLB_680015 | MPLB_1590018 | MPLB_680015 | MPLB_1590018 | Aminotransferase. | Ethanolamine-phosphate phospho-lyase (Modular protein). | 0.686 |
MPLB_680015 | MPLB_790069 | MPLB_680015 | MPLB_790069 | Aminotransferase. | Asparagine synthase. | 0.717 |
MPLB_680015 | MPLB_790132 | MPLB_680015 | MPLB_790132 | Aminotransferase. | 4Fe-4S ferredoxin-type domain-containing protein. | 0.658 |
MPLB_680015 | aspA | MPLB_680015 | MPLB_1710049 | Aminotransferase. | Aspartate ammonia-lyase. | 0.660 |
MPLB_680015 | gcvP | MPLB_680015 | MPLB_1190011 | Aminotransferase. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.641 |
MPLB_680015 | gltB | MPLB_680015 | MPLB_110020 | Aminotransferase. | Glutamate synthase, large subunit. | 0.837 |
MPLB_680015 | lysC | MPLB_680015 | MPLB_1420005 | Aminotransferase. | Aspartokinase; Belongs to the aspartokinase family. | 0.753 |
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