STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLB_680015Aminotransferase. (366 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase, large subunit.
    
 0.837
lysC
Aspartokinase; Belongs to the aspartokinase family.
  
 
 0.753
MPLB_790069
Asparagine synthase.
  
  
 0.717
trpE(G
Anthranilate synthase.
   
 0.706
MPLB_1590018
Ethanolamine-phosphate phospho-lyase (Modular protein).
  
 0.686
aspA
Aspartate ammonia-lyase.
    
 0.660
MPLB_790132
4Fe-4S ferredoxin-type domain-containing protein.
    
 0.658
pdhB
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.644
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.641
MPLB_1300013
Cystathionine beta-synthase.
 
  
 0.636
Your Current Organism:
Mesorhizobium sp. ORS3324
NCBI taxonomy Id: 408180
Other names: M. sp. ORS 3324, Mesorhizobium sp. ORS 3324
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