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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_100003Amidohydrolase 2. (295 aa)    
Predicted Functional Partners:
pld
Pyridoxal 4-dehydrogenase.
  
  
  0.891
MPLA_100004
VWA containing CoxE family protein.
       0.789
MPLA_340095
Amidohydrolase 2.
 
  
 
0.750
MPLA_100006
annotation not available
 
  
  0.643
MPLA_340087
Oxidoreductase domain protein.
  
  
  0.638
MPLA_140170
Putative TIM-barrel fold metal-dependent hydrolase.
 
  
 
0.618
MPLA_340084
L-fuconate dehydratase.
  
  
  0.606
MPLA_100007
Putative dehydrogenase.
 
  
  0.584
MPLA_100009
Molybdopterin dehydrogenase FAD-binding protein.
 
  
  0.583
xdhC
Xanthine dehydrogenase, Fe-S binding subunit.
    
  0.573
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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