STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsCD-ribose transporter subunit membrane component of ABC superfamily; Belongs to the binding-protein-dependent transport system permease family. (332 aa)    
Predicted Functional Partners:
MPLA_100014
Periplasmic sugar-binding protein of sugar ABC transporter.
  
  0.980
MPLA_100013
ABC transporter related protein.
  0.963
alsB
D-allose transporter subunit periplasmic-binding component of ABC superfamily.
 
  0.841
rbsA-2
Fused D-ribose transporter subunits of ABC superfamily: ATP-binding components.
 
  0.839
MPLA_140037
Putative D-ribose ABC transporter, periplasmic protein.
 
  0.838
MPLA_770012
Ribose ABC transporter, ribose-binding protein.
  
  0.829
MPLA_740016
Periplasmic binding protein/LacI transcriptional regulator.
 
  0.808
MPLA_1170008
Putative Sugar (D-ribose) ABC transporter (Permease protein); Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.801
ytfQ
Putative sugar transporter subunit: periplasmic-binding component of ABC superfamily.
  
  0.799
MPLA_1620019
Periplasmic ribose-binding protein, sugar ABC transporter.
 
  0.774
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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