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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_100025Putative sugar ABC transporter, permease protein ribose ABC transporter rbsC-like; Belongs to the binding-protein-dependent transport system permease family. (328 aa)    
Predicted Functional Partners:
rbsA
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  0.947
MPLA_100022
Putative sugar ABC transporter, substrate binding protein ribose ABC transporter.
 
  0.911
MPLA_140180
ABC-type sugar transport system, periplasmic component.
  
  0.846
MPLA_100024
Putative sugar ABC transporter, permease protein ribose ABC transporter rbsC-like; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.845
MPLA_770012
Ribose ABC transporter, ribose-binding protein.
  
  0.828
MPLA_140037
Putative D-ribose ABC transporter, periplasmic protein.
 
  0.826
rbsA-2
Fused D-ribose transporter subunits of ABC superfamily: ATP-binding components.
  
  0.823
MPLA_140057
ABC sugar transporter, periplasmic ligand binding protein.
 
  0.817
alsB
D-allose transporter subunit periplasmic-binding component of ABC superfamily.
 
  0.811
MPLA_740016
Periplasmic binding protein/LacI transcriptional regulator.
 
  0.810
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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