STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_100028Putative HTH-type transcriptional regulator rrf2-like. (149 aa)    
Predicted Functional Partners:
MPLA_290028
NifU_N domain-containing protein.
  
 
 0.964
MPLA_30081
Nitrogenase cofactor synthesis protein nifS.
 
 
 0.945
iscS
Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
  
 
 0.937
sufA
Fe-S cluster assembly protein; Belongs to the HesB/IscA family.
  
  
 0.858
MPLA_670093
Nitrogen fixation protein nifQ.
  
 
 0.779
fliG
Flagellar motor switch protein FliG.
    
   0.655
fdxB
2Fe-2S ferredoxin (FdII).
  
  
 0.590
MPLA_670021
Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.536
cysW
Sulfate/thiosulfate permease W protein (ABC superfamily, membrane).
 
   
 0.528
cysP
Thiosulfate transporter subunit periplasmic-binding component of ABC superfamily.
 
     0.525
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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